Publications

  1. Mikaeloff F, Gelpi M, Escos A, Knudsen AD, Høgh J, Benfield T, de Magalhães JP, Nielsen SD, Neogi U† (2023) Transcriptomics age acceleration in prolonged treated HIV infection Aging Cell Oct;22(10):e13951. doi: 10.1111/acel.13951 [PMID: 37548368]
  2. Svensson-Akusjärvi S, Krishnan S, Ambikan AT, Mikaeloff F, Ponnan SM, Nowak P, Vesterbacka J, Lourda M, Nowak P, Sönnerborg A, and Neogi U† (2023) Potential role of myeloid cells in system-level inflammatory and immunometabolic dysregulation during prolonged successful HIV-1 treatment. AIDS Feb 9. doi: 10.1097/QAD.0000000000003512. Online ahead of print. [PMID: 36779490]
  3. Mikaeloff F, Gelpi M, Benfeitas R, Knudsen AD, Vestad B, Høgh J, Hov JR, Benfield T, Murray D, Giske CG, Mardinoglu A, Trøseid M, Nielsen SD, Neogi U† (2023) Network-based multi-omics integration reveals metabolic at-risk profile within treated HIV-infection. eLife 023 Feb 16;12:e82785. doi: 10.7554/eLife.82785. Online ahead of print. [PMID: 36794912]
  4. Ambikan AT#, Svensson-Akusjärvi S#, Krishnan S, Sperk M, Nowak P, Vesterbacka J, Sönnerborg A, Benfeitas R, Neogi U†. (2022) Genome-scale metabolic model reveals long-term antiretroviral treatment-induced system-level metabolic shift towards oxidative phosphorylation in HIV-infection. Life Science Alliance. May 10;5(9):e202201405. doi: 10.26508/lsa.202201405. [PMID: 35537851]
  5. Svensson-Akusjärvi S, Krishnan S, Jütte BB, Ambikan AT, Gupta S, Rodriguez JE, Végvári A, Sperk M, Svensson JP, Sönnerborg A, and Neogi U† (2022) Peripheral blood CD4+CCR6+ compartment differentiates HIV-1 infected or seropositive elite controllers from long-term successfully treated individuals. Communications Biology April 13;5(1):357. doi: 10.1038/s42003-022-03315-x.  [PMID: 35418589]
  6. Akusjärvi SS, Ambikan AT,  Krishnan S,  Gupta S,  Sperk M,  Végvári Á,  Mikaeloff F,  Healy K,  Vesterbacka J,  Nowak P,  Sönnerborg A,  Neogi U†  (2022) Integrative proteo-transcriptomic and immunophenotyping signatures of HIV-1 elite control phenotype: A cross-talk between glycolysis and HIF signaling. iScience 25;1 103607- [PMID: 35005552]
  7. Mikaeloff F, Svensson Akusjärvi S,  Ikomey GM,  Krishnan S,  Sperk M,  Gupta S,  Magdaleno GDV,  Escós A,  Lyonga E,  Okomo MC,  Tagne CT, Babu H, Lorson CL, Végvári Á, Banerjea AC,  Kele J, Hanna LE,  Singh K,  de Magalhães JP, Benfeitas R,Neogi U† (2022) Trans cohort metabolic reprogramming towards glutaminolysis in long-term successfully treated HIV-infection. Communications Biology 5;1 27 [PMID: 35017663]
  8. Olund Villumsen S, Benfeitas R,  Knudsen AD,  Gelpi M,  Høgh J,  Thomsen MT,  Murray D,  Ullum H,  Neogi U†  ,  Nielsen SD. (2021) Integrative Lipidomics and Metabolomics for System-Level Understanding of the Metabolic Syndrome in Long-Term Treated HIV-Infected Individuals. Frontiers in Immunology 12; 742736- [PMID: 35095835]
  9. Sperk M, Ambikan AT,  Ray S,  Singh K,  Mikaeloff F,  Diez RC,  Narayanan A,  Vesterbacka J,  Nowak P,  Sönnerborg A,  Neogi U† (2021) Fecal Metabolome Signature in the HIV-1 Elite Control Phenotype: Enrichment of Dipeptides Acts as an HIV-1 Antagonist but a Prevotella Agonist. Journal of Virology 2021 95;18 e0047921- [PMID: 34232744]
  10. Sperk M, Mikaeloff F,  Svensson-Akusjarvi S,  Krishnan S,  Ponnan SM,  Ambikan AT,  Nowak P,  Sonnerborg A,  Neogi U† (2021) Distinct lipid profile, low-level inflammation, and increased antioxidant defense signature in HIV-1 elite control status. iScience 24;2 102111- [PMID: 33659876]
  11. Gelpi M, Mikaeloff F,  Knudsen AD,  Benfeitas R,  Krishnan S,  Svenssson Akusjärvi S,  Høgh J,  Murray DD,  Ullum H,  Neogi U†,  Nielsen SD. The central role of the glutamate metabolism in long-term antiretroviral treated HIV-infected individuals with metabolic syndrome. Aging 2021 13;19 22732-22751. [PMID: 34635603]
  12. Soares RRG, Varela JC,  Neogi U,  Ciftci S,  Ashokkumar M,  Pinto IF,  Nilsson M,  Madaboosi N,  Russom A. Sub-attomole detection of HIV-1 using padlock probes and rolling circle amplification combined with microfluidic affinity chromatography. Biosensors & Bioelectronics 2020 166; 112442- [PMID: 32755809]

Updated by:

ujjwalneogi 2024-01-12